Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vti1bO88384 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1bO88384 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Vti1bO88384 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1bO88384 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vti1bO88384 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1bO88384 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1bO88384 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1bO88384 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1bO88384 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Vti1bO88384 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Vti1bO88384 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1bO88384 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Vti1bO88384 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1bO88384 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1bO88384 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1bO88384 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1bO88384 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1bO88384 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1bO88384 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.24□□□□□ -0.13
Vti1bO88384 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.24□□□□□ -0.13
Vti1bO88384 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Vti1bO88384 Gm6376-201ENSMUST00000209407 580 ntBASIC14.24□□□□□ -0.13
Vti1bO88384 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Vti1bO88384 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1bO88384 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vti1bO88384 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vti1bO88384 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vti1bO88384 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vti1bO88384 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.23□□□□□ -0.13
Vti1bO88384 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vti1bO88384 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Vti1bO88384 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vti1bO88384 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Vti1bO88384 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Vti1bO88384 Mir8098-201ENSMUST00000184011 137 ntBASIC14.23□□□□□ -0.13
Vti1bO88384 Gm5864-201ENSMUST00000202263 970 ntBASIC14.23□□□□□ -0.13
Vti1bO88384 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vti1bO88384 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.23□□□□□ -0.13
Vti1bO88384 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vti1bO88384 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Vti1bO88384 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Vti1bO88384 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vti1bO88384 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vti1bO88384 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vti1bO88384 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vti1bO88384 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vti1bO88384 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vti1bO88384 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Vti1bO88384 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Vti1bO88384 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vti1bO88384 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vti1bO88384 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.22□□□□□ -0.13
Vti1bO88384 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.22□□□□□ -0.13
Vti1bO88384 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vti1bO88384 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.22□□□□□ -0.13
Vti1bO88384 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Gm13418-201ENSMUST00000119097 944 ntBASIC14.22□□□□□ -0.13
Vti1bO88384 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.22□□□□□ -0.13
Vti1bO88384 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.22□□□□□ -0.13
Vti1bO88384 Gm28659-201ENSMUST00000188013 759 ntBASIC14.22□□□□□ -0.13
Vti1bO88384 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vti1bO88384 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms