Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.54□□□□□ -0.24
Pdlim3O70209 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.54□□□□□ -0.24
Pdlim3O70209 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.54□□□□□ -0.24
Pdlim3O70209 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.54□□□□□ -0.24
Pdlim3O70209 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim3O70209 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.54□□□□□ -0.24
Pdlim3O70209 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim3O70209 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim3O70209 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Pdlim3O70209 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pdlim3O70209 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim3O70209 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.53□□□□□ -0.24
Pdlim3O70209 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.53□□□□□ -0.24
Pdlim3O70209 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim3O70209 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim3O70209 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim3O70209 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim3O70209 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.53□□□□□ -0.24
Pdlim3O70209 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim3O70209 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pdlim3O70209 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pdlim3O70209 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Pdlim3O70209 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim3O70209 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim3O70209 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim3O70209 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pdlim3O70209 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pdlim3O70209 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pdlim3O70209 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.53□□□□□ -0.24
Pdlim3O70209 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.53□□□□□ -0.24
Pdlim3O70209 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim3O70209 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Pdlim3O70209 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdlim3O70209 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Pdlim3O70209 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdlim3O70209 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdlim3O70209 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdlim3O70209 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Pdlim3O70209 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdlim3O70209 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdlim3O70209 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.52□□□□□ -0.25
Pdlim3O70209 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Pdlim3O70209 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.52□□□□□ -0.25
Pdlim3O70209 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim3O70209 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim3O70209 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim3O70209 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim3O70209 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim3O70209 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pdlim3O70209 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim3O70209 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pdlim3O70209 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim3O70209 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim3O70209 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim3O70209 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim3O70209 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pdlim3O70209 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Pdlim3O70209 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pdlim3O70209 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim3O70209 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim3O70209 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim3O70209 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim3O70209 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim3O70209 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdlim3O70209 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pdlim3O70209 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pdlim3O70209 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pdlim3O70209 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.51□□□□□ -0.25
Pdlim3O70209 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pdlim3O70209 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.51□□□□□ -0.25
Pdlim3O70209 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Gm10499-201ENSMUST00000174094 934 ntBASIC13.51□□□□□ -0.25
Pdlim3O70209 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim3O70209 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms