Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl13O55038 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.59□□□□□ -0.39
Cxcl13O55038 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Cxcl13O55038 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cxcl13O55038 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Cxcl13O55038 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cxcl13O55038 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cxcl13O55038 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Gm14057-201ENSMUST00000120631 482 ntBASIC12.59□□□□□ -0.39
Cxcl13O55038 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.59□□□□□ -0.39
Cxcl13O55038 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cxcl13O55038 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Cxcl13O55038 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cxcl13O55038 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.59□□□□□ -0.39
Cxcl13O55038 Gm18049-201ENSMUST00000208909 581 ntBASIC12.59□□□□□ -0.39
Cxcl13O55038 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cxcl13O55038 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl13O55038 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cxcl13O55038 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cxcl13O55038 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cxcl13O55038 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Cxcl13O55038 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.58□□□□□ -0.4
Cxcl13O55038 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.58□□□□□ -0.4
Cxcl13O55038 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
Cxcl13O55038 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cxcl13O55038 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Cxcl13O55038 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Gm6415-201ENSMUST00000118488 348 ntBASIC12.58□□□□□ -0.4
Cxcl13O55038 Gm15693-201ENSMUST00000120470 637 ntBASIC12.58□□□□□ -0.4
Cxcl13O55038 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Cxcl13O55038 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.58□□□□□ -0.4
Cxcl13O55038 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.58□□□□□ -0.4
Cxcl13O55038 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.58□□□□□ -0.4
Cxcl13O55038 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cxcl13O55038 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cxcl13O55038 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Cxcl13O55038 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cxcl13O55038 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.58□□□□□ -0.4
Cxcl13O55038 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl13O55038 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.58□□□□□ -0.4
Cxcl13O55038 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cxcl13O55038 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Sybu-209ENSMUST00000228639 4113 ntBASIC12.57□□□□□ -0.4
Cxcl13O55038 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cxcl13O55038 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl13O55038 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms