Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm7488-201ENSMUST00000117148 684 ntBASIC16.39■□□□□ 0.21
Prom1O54990 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Prom1O54990 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.39■□□□□ 0.21
Prom1O54990 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.39■□□□□ 0.21
Prom1O54990 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Prom1O54990 Gm6218-201ENSMUST00000219812 628 ntBASIC16.39■□□□□ 0.21
Prom1O54990 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
Prom1O54990 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prom1O54990 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Prom1O54990 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
Prom1O54990 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prom1O54990 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Prom1O54990 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prom1O54990 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Prom1O54990 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prom1O54990 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Prom1O54990 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.39■□□□□ 0.21
Prom1O54990 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prom1O54990 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prom1O54990 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prom1O54990 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prom1O54990 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prom1O54990 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prom1O54990 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prom1O54990 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prom1O54990 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prom1O54990 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prom1O54990 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Prom1O54990 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.38■□□□□ 0.21
Prom1O54990 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prom1O54990 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prom1O54990 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prom1O54990 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prom1O54990 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Prom1O54990 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Prom1O54990 Gm5566-201ENSMUST00000116118 459 ntBASIC16.38■□□□□ 0.21
Prom1O54990 Gm15321-201ENSMUST00000121290 288 ntBASIC16.38■□□□□ 0.21
Prom1O54990 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prom1O54990 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.38■□□□□ 0.21
Prom1O54990 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prom1O54990 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prom1O54990 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Prom1O54990 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.38■□□□□ 0.21
Prom1O54990 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prom1O54990 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prom1O54990 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Prom1O54990 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prom1O54990 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prom1O54990 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prom1O54990 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prom1O54990 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Prom1O54990 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prom1O54990 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.38■□□□□ 0.21
Prom1O54990 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prom1O54990 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Prom1O54990 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Prom1O54990 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Prom1O54990 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prom1O54990 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prom1O54990 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prom1O54990 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Prom1O54990 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prom1O54990 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prom1O54990 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Prom1O54990 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.37■□□□□ 0.21
Prom1O54990 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.37■□□□□ 0.21
Prom1O54990 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prom1O54990 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prom1O54990 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prom1O54990 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Prom1O54990 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.37■□□□□ 0.21
Prom1O54990 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prom1O54990 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prom1O54990 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prom1O54990 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prom1O54990 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prom1O54990 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prom1O54990 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prom1O54990 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Prom1O54990 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Prom1O54990 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.36■□□□□ 0.21
Prom1O54990 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 Gm29667-201ENSMUST00000190817 490 ntBASIC16.36■□□□□ 0.21
Prom1O54990 Gm43438-201ENSMUST00000198133 379 ntBASIC16.36■□□□□ 0.21
Prom1O54990 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prom1O54990 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms