Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf13O54965 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf13O54965 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf13O54965 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf13O54965 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf13O54965 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Rnf13O54965 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.54□□□□□ -0.24
Rnf13O54965 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rnf13O54965 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Rnf13O54965 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Rnf13O54965 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.54□□□□□ -0.24
Rnf13O54965 Gm15358-201ENSMUST00000119249 520 ntBASIC13.54□□□□□ -0.24
Rnf13O54965 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rnf13O54965 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.54□□□□□ -0.24
Rnf13O54965 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Rnf13O54965 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Rnf13O54965 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Rnf13O54965 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rnf13O54965 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Rnf13O54965 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf13O54965 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rnf13O54965 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.53□□□□□ -0.24
Rnf13O54965 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.53□□□□□ -0.24
Rnf13O54965 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Gm23547-201ENSMUST00000158210 271 ntBASIC13.53□□□□□ -0.24
Rnf13O54965 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rnf13O54965 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Rnf13O54965 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.53□□□□□ -0.24
Rnf13O54965 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Rnf13O54965 Gm8655-201ENSMUST00000221159 852 ntBASIC13.53□□□□□ -0.24
Rnf13O54965 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rnf13O54965 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.53□□□□□ -0.24
Rnf13O54965 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.53□□□□□ -0.24
Rnf13O54965 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Rnf13O54965 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf13O54965 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf13O54965 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf13O54965 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf13O54965 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf13O54965 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf13O54965 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf13O54965 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf13O54965 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf13O54965 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf13O54965 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf13O54965 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf13O54965 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf13O54965 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf13O54965 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf13O54965 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Rnf13O54965 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf13O54965 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms