Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk3O35492 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.22□□□□□ -0.13
Clk3O35492 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk3O35492 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk3O35492 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.22□□□□□ -0.13
Clk3O35492 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.22□□□□□ -0.13
Clk3O35492 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Clk3O35492 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.22□□□□□ -0.13
Clk3O35492 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk3O35492 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk3O35492 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.22□□□□□ -0.13
Clk3O35492 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clk3O35492 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.22□□□□□ -0.13
Clk3O35492 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clk3O35492 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk3O35492 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.22□□□□□ -0.13
Clk3O35492 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clk3O35492 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk3O35492 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clk3O35492 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk3O35492 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Clk3O35492 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk3O35492 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Clk3O35492 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk3O35492 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.22□□□□□ -0.13
Clk3O35492 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk3O35492 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clk3O35492 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk3O35492 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Clk3O35492 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clk3O35492 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clk3O35492 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk3O35492 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clk3O35492 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clk3O35492 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.21□□□□□ -0.13
Clk3O35492 Gm13418-201ENSMUST00000119097 944 ntBASIC14.21□□□□□ -0.13
Clk3O35492 Gm15358-201ENSMUST00000119249 520 ntBASIC14.21□□□□□ -0.13
Clk3O35492 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.21□□□□□ -0.13
Clk3O35492 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Clk3O35492 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.21□□□□□ -0.13
Clk3O35492 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clk3O35492 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.21□□□□□ -0.13
Clk3O35492 Gm6296-201ENSMUST00000222599 943 ntBASIC14.21□□□□□ -0.13
Clk3O35492 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk3O35492 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk3O35492 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk3O35492 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.21□□□□□ -0.13
Clk3O35492 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Clk3O35492 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Clk3O35492 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clk3O35492 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk3O35492 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.21□□□□□ -0.14
Clk3O35492 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Clk3O35492 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Clk3O35492 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clk3O35492 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.2□□□□□ -0.14
Clk3O35492 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Clk3O35492 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Clk3O35492 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.2□□□□□ -0.14
Clk3O35492 Gm14722-201ENSMUST00000118943 689 ntBASIC14.2□□□□□ -0.14
Clk3O35492 Gm27741-201ENSMUST00000185060 237 ntBASIC14.2□□□□□ -0.14
Clk3O35492 Gm44357-201ENSMUST00000195897 142 ntBASIC14.2□□□□□ -0.14
Clk3O35492 Gm19658-201ENSMUST00000196231 138 ntBASIC14.2□□□□□ -0.14
Clk3O35492 Gm44367-201ENSMUST00000196836 138 ntBASIC14.2□□□□□ -0.14
Clk3O35492 Gm44350-201ENSMUST00000197197 138 ntBASIC14.2□□□□□ -0.14
Clk3O35492 Gm44390-201ENSMUST00000197533 144 ntBASIC14.2□□□□□ -0.14
Clk3O35492 Gm44313-201ENSMUST00000198018 138 ntBASIC14.2□□□□□ -0.14
Clk3O35492 Gm44486-201ENSMUST00000198508 138 ntBASIC14.2□□□□□ -0.14
Clk3O35492 Gm44314-201ENSMUST00000199263 138 ntBASIC14.2□□□□□ -0.14
Clk3O35492 Gm44394-201ENSMUST00000199558 138 ntBASIC14.2□□□□□ -0.14
Clk3O35492 Gm44484-201ENSMUST00000199873 138 ntBASIC14.2□□□□□ -0.14
Clk3O35492 Gm44466-201ENSMUST00000200264 138 ntBASIC14.2□□□□□ -0.14
Clk3O35492 Gm44359-201ENSMUST00000200671 138 ntBASIC14.2□□□□□ -0.14
Clk3O35492 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.2□□□□□ -0.14
Clk3O35492 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.2□□□□□ -0.14
Clk3O35492 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk3O35492 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk3O35492 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.19□□□□□ -0.14
Clk3O35492 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms