Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Ebf3O08791 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ebf3O08791 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.5■□□□□ 0.07
Ebf3O08791 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.5■□□□□ 0.07
Ebf3O08791 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.5■□□□□ 0.07
Ebf3O08791 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.5■□□□□ 0.07
Ebf3O08791 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.5■□□□□ 0.07
Ebf3O08791 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Ebf3O08791 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ebf3O08791 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ebf3O08791 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.5■□□□□ 0.07
Ebf3O08791 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf3O08791 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.49■□□□□ 0.07
Ebf3O08791 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Ebf3O08791 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Ebf3O08791 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.49■□□□□ 0.07
Ebf3O08791 Mir7023-201ENSMUST00000185093 64 ntBASIC15.49■□□□□ 0.07
Ebf3O08791 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.49■□□□□ 0.07
Ebf3O08791 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf3O08791 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf3O08791 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf3O08791 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf3O08791 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Ebf3O08791 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf3O08791 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.48■□□□□ 0.07
Ebf3O08791 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf3O08791 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ebf3O08791 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Ebf3O08791 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ebf3O08791 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Ebf3O08791 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ebf3O08791 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Ebf3O08791 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.48■□□□□ 0.07
Ebf3O08791 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf3O08791 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ebf3O08791 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf3O08791 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf3O08791 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf3O08791 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf3O08791 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf3O08791 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf3O08791 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ebf3O08791 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ebf3O08791 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ebf3O08791 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ebf3O08791 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ebf3O08791 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.47■□□□□ 0.07
Ebf3O08791 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ebf3O08791 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ebf3O08791 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ebf3O08791 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ebf3O08791 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ebf3O08791 Gm24158-201ENSMUST00000175263 71 ntBASIC15.47■□□□□ 0.07
Ebf3O08791 Gm27430-201ENSMUST00000184585 107 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms