Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gm15483-201ENSMUST00000120338 456 ntBASIC17.43■□□□□ 0.38
Tcof1O08784 Gm18889-201ENSMUST00000174284 929 ntBASIC17.43■□□□□ 0.38
Tcof1O08784 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tcof1O08784 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.43■□□□□ 0.38
Tcof1O08784 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.43■□□□□ 0.38
Tcof1O08784 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.43■□□□□ 0.38
Tcof1O08784 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tcof1O08784 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tcof1O08784 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tcof1O08784 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tcof1O08784 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tcof1O08784 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Tcof1O08784 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tcof1O08784 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tcof1O08784 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tcof1O08784 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tcof1O08784 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tcof1O08784 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.42■□□□□ 0.38
Tcof1O08784 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tcof1O08784 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tcof1O08784 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tcof1O08784 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tcof1O08784 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tcof1O08784 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.42■□□□□ 0.38
Tcof1O08784 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tcof1O08784 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tcof1O08784 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tcof1O08784 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.42■□□□□ 0.38
Tcof1O08784 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tcof1O08784 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Tcof1O08784 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Tcof1O08784 Gm6973-201ENSMUST00000117080 721 ntBASIC17.42■□□□□ 0.38
Tcof1O08784 Rprl2-201ENSMUST00000157150 290 ntBASIC17.42■□□□□ 0.38
Tcof1O08784 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.42■□□□□ 0.38
Tcof1O08784 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tcof1O08784 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.42■□□□□ 0.38
Tcof1O08784 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Tcof1O08784 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.41■□□□□ 0.38
Tcof1O08784 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Tcof1O08784 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tcof1O08784 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tcof1O08784 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tcof1O08784 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tcof1O08784 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Tcof1O08784 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tcof1O08784 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tcof1O08784 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tcof1O08784 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tcof1O08784 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Tcof1O08784 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.41■□□□□ 0.38
Tcof1O08784 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.41■□□□□ 0.38
Tcof1O08784 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.41■□□□□ 0.38
Tcof1O08784 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tcof1O08784 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Tcof1O08784 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Tcof1O08784 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.41■□□□□ 0.38
Tcof1O08784 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tcof1O08784 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.41■□□□□ 0.38
Tcof1O08784 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.41■□□□□ 0.38
Tcof1O08784 Mir6990-201ENSMUST00000183724 91 ntBASIC17.41■□□□□ 0.38
Tcof1O08784 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.41■□□□□ 0.38
Tcof1O08784 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.41■□□□□ 0.38
Tcof1O08784 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.41■□□□□ 0.38
Tcof1O08784 Gm44872-201ENSMUST00000207864 420 ntBASIC17.41■□□□□ 0.38
Tcof1O08784 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.41■□□□□ 0.38
Tcof1O08784 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
Tcof1O08784 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tcof1O08784 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tcof1O08784 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tcof1O08784 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tcof1O08784 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tcof1O08784 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tcof1O08784 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tcof1O08784 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tcof1O08784 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tcof1O08784 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tcof1O08784 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.4■□□□□ 0.38
Tcof1O08784 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Tcof1O08784 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Tcof1O08784 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.4■□□□□ 0.38
Tcof1O08784 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tcof1O08784 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Tcof1O08784 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tcof1O08784 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Tcof1O08784 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.4■□□□□ 0.38
Tcof1O08784 Gm14057-201ENSMUST00000120631 482 ntBASIC17.4■□□□□ 0.38
Tcof1O08784 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Tcof1O08784 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Tcof1O08784 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.4■□□□□ 0.38
Tcof1O08784 Gm18057-201ENSMUST00000208220 503 ntBASIC17.4■□□□□ 0.38
Tcof1O08784 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tcof1O08784 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Tcof1O08784 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.4■□□□□ 0.38
Tcof1O08784 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tcof1O08784 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tcof1O08784 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tcof1O08784 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tcof1O08784 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tcof1O08784 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tcof1O08784 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms