Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Polr2jO08740 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.33□□□□□ -0.12
Polr2jO08740 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Polr2jO08740 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Polr2jO08740 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Polr2jO08740 Gm12644-201ENSMUST00000119935 606 ntBASIC14.33□□□□□ -0.12
Polr2jO08740 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Polr2jO08740 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Polr2jO08740 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.33□□□□□ -0.12
Polr2jO08740 Gm27646-201ENSMUST00000183989 110 ntBASIC14.33□□□□□ -0.12
Polr2jO08740 Gm43767-201ENSMUST00000198933 381 ntBASIC14.33□□□□□ -0.12
Polr2jO08740 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Polr2jO08740 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Polr2jO08740 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Polr2jO08740 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Polr2jO08740 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Polr2jO08740 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Polr2jO08740 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Polr2jO08740 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Polr2jO08740 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Polr2jO08740 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Polr2jO08740 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.32□□□□□ -0.12
Polr2jO08740 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Polr2jO08740 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Polr2jO08740 Gm6296-201ENSMUST00000222599 943 ntBASIC14.32□□□□□ -0.12
Polr2jO08740 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.32□□□□□ -0.12
Polr2jO08740 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Polr2jO08740 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Polr2jO08740 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Polr2jO08740 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.31□□□□□ -0.12
Polr2jO08740 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Polr2jO08740 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.31□□□□□ -0.12
Polr2jO08740 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.31□□□□□ -0.12
Polr2jO08740 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.31□□□□□ -0.12
Polr2jO08740 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Polr2jO08740 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Polr2jO08740 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Polr2jO08740 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Polr2jO08740 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Polr2jO08740 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Polr2jO08740 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.3□□□□□ -0.12
Polr2jO08740 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Polr2jO08740 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Polr2jO08740 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Polr2jO08740 Gm13836-201ENSMUST00000121159 501 ntBASIC14.3□□□□□ -0.12
Polr2jO08740 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Polr2jO08740 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Polr2jO08740 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Polr2jO08740 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Polr2jO08740 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Polr2jO08740 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.3□□□□□ -0.12
Polr2jO08740 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms