Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Tnfrsf11bO08712 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.17■□□□□ 0.02
Tnfrsf11bO08712 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf11bO08712 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf11bO08712 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.17■□□□□ 0.02
Tnfrsf11bO08712 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.17■□□□□ 0.02
Tnfrsf11bO08712 Gm6550-201ENSMUST00000187574 993 ntBASIC15.17■□□□□ 0.02
Tnfrsf11bO08712 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.17■□□□□ 0.02
Tnfrsf11bO08712 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf11bO08712 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf11bO08712 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf11bO08712 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf11bO08712 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Gm45167-201ENSMUST00000208007 322 ntBASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.16■□□□□ 0.02
Tnfrsf11bO08712 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Gm7862-201ENSMUST00000121461 292 ntBASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Gm23547-201ENSMUST00000158210 271 ntBASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf11bO08712 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Gm12008-201ENSMUST00000117791 755 ntBASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.14■□□□□ 0.01
Tnfrsf11bO08712 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms