Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Gm3727J3QM54 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Gm715-201ENSMUST00000117865 831 ntBASIC12.69□□□□□ -0.38
Gm3727J3QM54 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3727J3QM54 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.69□□□□□ -0.38
Gm3727J3QM54 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3727J3QM54 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3727J3QM54 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.68□□□□□ -0.38
Gm3727J3QM54 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Gm3727J3QM54 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
Gm3727J3QM54 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.67□□□□□ -0.38
Gm3727J3QM54 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3727J3QM54 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm3727J3QM54 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm3727J3QM54 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm3727J3QM54 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm3727J3QM54 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm3727J3QM54 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.66□□□□□ -0.38
Gm3727J3QM54 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms