Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TprF6ZDS4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
TprF6ZDS4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TprF6ZDS4 Gm6218-201ENSMUST00000219812 628 ntBASIC13.71□□□□□ -0.22
TprF6ZDS4 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TprF6ZDS4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TprF6ZDS4 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.7□□□□□ -0.22
TprF6ZDS4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TprF6ZDS4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TprF6ZDS4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.7□□□□□ -0.22
TprF6ZDS4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TprF6ZDS4 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.7□□□□□ -0.22
TprF6ZDS4 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.7□□□□□ -0.22
TprF6ZDS4 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TprF6ZDS4 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TprF6ZDS4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TprF6ZDS4 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TprF6ZDS4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TprF6ZDS4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TprF6ZDS4 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.7□□□□□ -0.22
TprF6ZDS4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TprF6ZDS4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TprF6ZDS4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TprF6ZDS4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TprF6ZDS4 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.7□□□□□ -0.22
TprF6ZDS4 Gm10499-201ENSMUST00000174094 934 ntBASIC13.7□□□□□ -0.22
TprF6ZDS4 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TprF6ZDS4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
TprF6ZDS4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TprF6ZDS4 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TprF6ZDS4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TprF6ZDS4 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TprF6ZDS4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TprF6ZDS4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.69□□□□□ -0.22
TprF6ZDS4 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TprF6ZDS4 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TprF6ZDS4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.69□□□□□ -0.22
TprF6ZDS4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TprF6ZDS4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TprF6ZDS4 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TprF6ZDS4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.69□□□□□ -0.22
TprF6ZDS4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TprF6ZDS4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TprF6ZDS4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TprF6ZDS4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TprF6ZDS4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TprF6ZDS4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TprF6ZDS4 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TprF6ZDS4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TprF6ZDS4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TprF6ZDS4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TprF6ZDS4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TprF6ZDS4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
TprF6ZDS4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.69□□□□□ -0.22
TprF6ZDS4 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.69□□□□□ -0.22
TprF6ZDS4 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TprF6ZDS4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
TprF6ZDS4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.68□□□□□ -0.22
TprF6ZDS4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TprF6ZDS4 Gm14767-201ENSMUST00000121559 586 ntBASIC13.68□□□□□ -0.22
TprF6ZDS4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 Syt7-204ENSMUST00000223586 1344 ntBASIC13.68□□□□□ -0.22
TprF6ZDS4 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.68□□□□□ -0.22
TprF6ZDS4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TprF6ZDS4 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.68□□□□□ -0.22
TprF6ZDS4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TprF6ZDS4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
TprF6ZDS4 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.68□□□□□ -0.22
TprF6ZDS4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.68□□□□□ -0.22
TprF6ZDS4 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TprF6ZDS4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.68□□□□□ -0.22
TprF6ZDS4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.68□□□□□ -0.22
TprF6ZDS4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TprF6ZDS4 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TprF6ZDS4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TprF6ZDS4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TprF6ZDS4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TprF6ZDS4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TprF6ZDS4 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
TprF6ZDS4 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TprF6ZDS4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms