Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC20.16■□□□□ 0.82
Zc3h13E9Q784 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h13E9Q784 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h13E9Q784 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC20.16■□□□□ 0.82
Zc3h13E9Q784 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h13E9Q784 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h13E9Q784 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h13E9Q784 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Zc3h13E9Q784 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h13E9Q784 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h13E9Q784 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h13E9Q784 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h13E9Q784 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h13E9Q784 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Zc3h13E9Q784 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC20.16■□□□□ 0.82
Zc3h13E9Q784 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h13E9Q784 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Zc3h13E9Q784 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h13E9Q784 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Zc3h13E9Q784 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3h13E9Q784 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Zc3h13E9Q784 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Zc3h13E9Q784 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3h13E9Q784 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3h13E9Q784 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3h13E9Q784 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC20.15■□□□□ 0.82
Zc3h13E9Q784 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3h13E9Q784 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3h13E9Q784 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3h13E9Q784 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3h13E9Q784 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3h13E9Q784 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC20.15■□□□□ 0.82
Zc3h13E9Q784 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3h13E9Q784 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
Zc3h13E9Q784 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Zc3h13E9Q784 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.82
Zc3h13E9Q784 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Zc3h13E9Q784 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Zc3h13E9Q784 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC20.14■□□□□ 0.81
Zc3h13E9Q784 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC20.14■□□□□ 0.81
Zc3h13E9Q784 Gm27514-201ENSMUST00000183692 110 ntBASIC20.14■□□□□ 0.81
Zc3h13E9Q784 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3h13E9Q784 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC20.14■□□□□ 0.81
Zc3h13E9Q784 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3h13E9Q784 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3h13E9Q784 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3h13E9Q784 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3h13E9Q784 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3h13E9Q784 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3h13E9Q784 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC20.14■□□□□ 0.81
Zc3h13E9Q784 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3h13E9Q784 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3h13E9Q784 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC20.14■□□□□ 0.81
Zc3h13E9Q784 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3h13E9Q784 Gm9252-201ENSMUST00000172364 1602 ntBASIC20.14■□□□□ 0.81
Zc3h13E9Q784 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h13E9Q784 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h13E9Q784 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Zc3h13E9Q784 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h13E9Q784 Mir8109-201ENSMUST00000184375 117 ntBASIC20.13■□□□□ 0.81
Zc3h13E9Q784 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Zc3h13E9Q784 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h13E9Q784 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h13E9Q784 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h13E9Q784 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h13E9Q784 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h13E9Q784 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h13E9Q784 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h13E9Q784 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h13E9Q784 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h13E9Q784 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h13E9Q784 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h13E9Q784 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Zc3h13E9Q784 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h13E9Q784 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h13E9Q784 Ccdc166-201ENSMUST00000182172 2584 ntBASIC20.13■□□□□ 0.81
Zc3h13E9Q784 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h13E9Q784 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3h13E9Q784 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC20.12■□□□□ 0.81
Zc3h13E9Q784 Gm42690-201ENSMUST00000197921 1836 ntBASIC20.12■□□□□ 0.81
Zc3h13E9Q784 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.12■□□□□ 0.81
Zc3h13E9Q784 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC20.12■□□□□ 0.81
Zc3h13E9Q784 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3h13E9Q784 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3h13E9Q784 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3h13E9Q784 Gm27243-201ENSMUST00000183964 521 ntBASIC20.12■□□□□ 0.81
Zc3h13E9Q784 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3h13E9Q784 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Zc3h13E9Q784 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC20.12■□□□□ 0.81
Zc3h13E9Q784 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3h13E9Q784 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC20.12■□□□□ 0.81
Zc3h13E9Q784 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3h13E9Q784 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3h13E9Q784 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3h13E9Q784 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zc3h13E9Q784 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zc3h13E9Q784 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zc3h13E9Q784 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC20.11■□□□□ 0.81
Zc3h13E9Q784 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zc3h13E9Q784 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms