Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdr1E9Q0B4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdr1E9Q0B4 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdr1E9Q0B4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdr1E9Q0B4 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.73□□□□□ -0.05
Cdr1E9Q0B4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdr1E9Q0B4 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cdr1E9Q0B4 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.73□□□□□ -0.05
Cdr1E9Q0B4 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdr1E9Q0B4 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Gm715-201ENSMUST00000117865 831 ntBASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Mir1668-201ENSMUST00000184114 107 ntBASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdr1E9Q0B4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdr1E9Q0B4 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdr1E9Q0B4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Cdr1E9Q0B4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.71□□□□□ -0.06
Cdr1E9Q0B4 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdr1E9Q0B4 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdr1E9Q0B4 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdr1E9Q0B4 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdr1E9Q0B4 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms