Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 AC110817.1-201ENSMUST00000225706 605 ntBASIC20.53■□□□□ 0.88
Scaf11E9PZM7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf11E9PZM7 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf11E9PZM7 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf11E9PZM7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf11E9PZM7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf11E9PZM7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Scaf11E9PZM7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scaf11E9PZM7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Gm12585-201ENSMUST00000117307 290 ntBASIC20.52■□□□□ 0.88
Scaf11E9PZM7 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Gm7446-201ENSMUST00000221035 1240 ntBASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Dancr-204ENSMUST00000132389 2347 ntBASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Gm5763-201ENSMUST00000155951 1530 ntBASIC20.52■□□□□ 0.88
Scaf11E9PZM7 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Scaf11E9PZM7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scaf11E9PZM7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scaf11E9PZM7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC20.52■□□□□ 0.87
Scaf11E9PZM7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.52■□□□□ 0.87
Scaf11E9PZM7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC20.52■□□□□ 0.87
Scaf11E9PZM7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC20.52■□□□□ 0.87
Scaf11E9PZM7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scaf11E9PZM7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scaf11E9PZM7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scaf11E9PZM7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scaf11E9PZM7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
Scaf11E9PZM7 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scaf11E9PZM7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scaf11E9PZM7 Gm17794-201ENSMUST00000220252 955 ntBASIC20.51■□□□□ 0.87
Scaf11E9PZM7 AC121804.3-201ENSMUST00000223420 295 ntBASIC20.51■□□□□ 0.87
Scaf11E9PZM7 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC20.51■□□□□ 0.87
Scaf11E9PZM7 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scaf11E9PZM7 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Scaf11E9PZM7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scaf11E9PZM7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scaf11E9PZM7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scaf11E9PZM7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Gm13464-201ENSMUST00000119418 935 ntBASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Gm6916-202ENSMUST00000205523 195 ntBASIC20.5■□□□□ 0.87
Scaf11E9PZM7 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Gm7172-201ENSMUST00000218047 1152 ntBASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Gm2495-201ENSMUST00000191160 466 ntBASIC20.5■□□□□ 0.87
Scaf11E9PZM7 CT485787.1-201ENSMUST00000225617 968 ntBASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Scaf11E9PZM7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf11E9PZM7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf11E9PZM7 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf11E9PZM7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf11E9PZM7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf11E9PZM7 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Scaf11E9PZM7 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf11E9PZM7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf11E9PZM7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf11E9PZM7 Gm26917-202ENSMUST00000192833 3329 ntBASIC20.49■□□□□ 0.87
Scaf11E9PZM7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf11E9PZM7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf11E9PZM7 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scaf11E9PZM7 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Scaf11E9PZM7 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms