Protein–RNA interactions for Protein: E9PUP3

Slc4a9, Anion exchange protein, mousemouse

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a9E9PUP3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Gm12585-201ENSMUST00000117307 290 ntBASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Mir3547-201ENSMUST00000175461 88 ntBASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Gm45098-201ENSMUST00000207179 657 ntBASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc4a9E9PUP3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 Gm9816-201ENSMUST00000122292 1414 ntBASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc4a9E9PUP3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc4a9E9PUP3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.16■□□□□ 0.34
Slc4a9E9PUP3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc4a9E9PUP3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc4a9E9PUP3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc4a9E9PUP3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc4a9E9PUP3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Slc4a9E9PUP3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc4a9E9PUP3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Slc4a9E9PUP3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Slc4a9E9PUP3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc4a9E9PUP3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.16■□□□□ 0.34
Slc4a9E9PUP3 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.16■□□□□ 0.34
Slc4a9E9PUP3 Mir125a-201ENSMUST00000083545 68 ntBASIC17.16■□□□□ 0.34
Slc4a9E9PUP3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc4a9E9PUP3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc4a9E9PUP3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc4a9E9PUP3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc4a9E9PUP3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Slc4a9E9PUP3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Slc4a9E9PUP3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC17.15■□□□□ 0.34
Slc4a9E9PUP3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc4a9E9PUP3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc4a9E9PUP3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc4a9E9PUP3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc4a9E9PUP3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc4a9E9PUP3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC17.15■□□□□ 0.34
Slc4a9E9PUP3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc4a9E9PUP3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc4a9E9PUP3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc4a9E9PUP3 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.15■□□□□ 0.34
Slc4a9E9PUP3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc4a9E9PUP3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc4a9E9PUP3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc4a9E9PUP3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc4a9E9PUP3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc4a9E9PUP3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc4a9E9PUP3 Gm27486-201ENSMUST00000184923 80 ntBASIC17.14■□□□□ 0.33
Slc4a9E9PUP3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Slc4a9E9PUP3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.14■□□□□ 0.33
Slc4a9E9PUP3 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.14■□□□□ 0.33
Slc4a9E9PUP3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc4a9E9PUP3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc4a9E9PUP3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Slc4a9E9PUP3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc4a9E9PUP3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc4a9E9PUP3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms