Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Shank1D3YZU1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shank1D3YZU1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shank1D3YZU1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shank1D3YZU1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shank1D3YZU1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Gm45384-201ENSMUST00000210451 277 ntBASIC13.35□□□□□ -0.27
Shank1D3YZU1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Gm6180-201ENSMUST00000065243 498 ntBASIC13.35□□□□□ -0.27
Shank1D3YZU1 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.35□□□□□ -0.27
Shank1D3YZU1 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.35□□□□□ -0.27
Shank1D3YZU1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Gm6007-201ENSMUST00000208170 823 ntBASIC13.35□□□□□ -0.27
Shank1D3YZU1 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shank1D3YZU1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.35□□□□□ -0.27
Shank1D3YZU1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.34□□□□□ -0.27
Shank1D3YZU1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Gm28631-201ENSMUST00000190740 334 ntBASIC13.34□□□□□ -0.27
Shank1D3YZU1 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.34□□□□□ -0.27
Shank1D3YZU1 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Shd-206ENSMUST00000225145 998 ntBASIC13.34□□□□□ -0.27
Shank1D3YZU1 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Shank1D3YZU1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.34□□□□□ -0.27
Shank1D3YZU1 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.34□□□□□ -0.27
Shank1D3YZU1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Gm9719-201ENSMUST00000162765 543 ntBASIC13.34□□□□□ -0.27
Shank1D3YZU1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.34□□□□□ -0.27
Shank1D3YZU1 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.34□□□□□ -0.27
Shank1D3YZU1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shank1D3YZU1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Shank1D3YZU1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.33□□□□□ -0.27
Shank1D3YZU1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
Shank1D3YZU1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shank1D3YZU1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.33□□□□□ -0.28
Shank1D3YZU1 App-207ENSMUST00000227737 2827 ntBASIC13.33□□□□□ -0.28
Shank1D3YZU1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shank1D3YZU1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shank1D3YZU1 Gm24543-201ENSMUST00000103867 82 ntBASIC13.33□□□□□ -0.28
Shank1D3YZU1 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.33□□□□□ -0.28
Shank1D3YZU1 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.33□□□□□ -0.28
Shank1D3YZU1 Gm14042-201ENSMUST00000120139 833 ntBASIC13.33□□□□□ -0.28
Shank1D3YZU1 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.33□□□□□ -0.28
Shank1D3YZU1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Shank1D3YZU1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shank1D3YZU1 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shank1D3YZU1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shank1D3YZU1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shank1D3YZU1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shank1D3YZU1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shank1D3YZU1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Shank1D3YZU1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms