Protein–RNA interactions for Protein: B4XVP9

Phf11c, PHD finger protein 11C, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11cB4XVP9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phf11cB4XVP9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Gm10499-201ENSMUST00000174094 934 ntBASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Gm27357-201ENSMUST00000183754 135 ntBASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Gm27646-201ENSMUST00000183989 110 ntBASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.17□□□□□ -0.14
Phf11cB4XVP9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.16□□□□□ -0.14
Phf11cB4XVP9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 Gm14859-201ENSMUST00000117752 357 ntBASIC14.15□□□□□ -0.14
Phf11cB4XVP9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Phf11cB4XVP9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Phf11cB4XVP9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms