Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.25□□□□□ -0.29
Gm11127A7VMS2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm11127A7VMS2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm11127A7VMS2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm11127A7VMS2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm11127A7VMS2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm11127A7VMS2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Gm11127A7VMS2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Gm11127A7VMS2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm11127A7VMS2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Gm11127A7VMS2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm11127A7VMS2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Gm23547-201ENSMUST00000158210 271 ntBASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.23□□□□□ -0.29
Gm11127A7VMS2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Gm7284-201ENSMUST00000131667 944 ntBASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Rprl3-201ENSMUST00000157400 290 ntBASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Gm25406-201ENSMUST00000157599 105 ntBASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Mir3081-201ENSMUST00000175305 84 ntBASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Gm27704-201ENSMUST00000185094 107 ntBASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm11127A7VMS2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms