Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12-1A0N8R1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Gm4535-201ENSMUST00000182274 558 ntBASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Gm10355-201ENSMUST00000097146 517 ntBASIC12.46□□□□□ -0.41
Trav12-1A0N8R1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12-1A0N8R1 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12-1A0N8R1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav12-1A0N8R1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12-1A0N8R1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12-1A0N8R1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12-1A0N8R1 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.46□□□□□ -0.42
Trav12-1A0N8R1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.46□□□□□ -0.42
Trav12-1A0N8R1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12-1A0N8R1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12-1A0N8R1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12-1A0N8R1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Gm14859-201ENSMUST00000117752 357 ntBASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-1A0N8R1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-1A0N8R1 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms