Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Gm27300-201ENSMUST00000184085 97 ntBASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Gm27335-201ENSMUST00000184758 97 ntBASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.42□□□□□ -0.42
Lnp1A0A1B0GSK3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lnp1A0A1B0GSK3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lnp1A0A1B0GSK3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lnp1A0A1B0GSK3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lnp1A0A1B0GSK3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lnp1A0A1B0GSK3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lnp1A0A1B0GSK3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lnp1A0A1B0GSK3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.4□□□□□ -0.42
Lnp1A0A1B0GSK3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lnp1A0A1B0GSK3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lnp1A0A1B0GSK3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lnp1A0A1B0GSK3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lnp1A0A1B0GSK3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lnp1A0A1B0GSK3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.4□□□□□ -0.42
Lnp1A0A1B0GSK3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Lnp1A0A1B0GSK3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.4□□□□□ -0.42
Lnp1A0A1B0GSK3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms