Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igkv8-27A0A0G2JF28 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igkv8-27A0A0G2JF28 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igkv8-27A0A0G2JF28 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igkv8-27A0A0G2JF28 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igkv8-27A0A0G2JF28 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Igkv8-27A0A0G2JF28 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igkv8-27A0A0G2JF28 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Igkv8-27A0A0G2JF28 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igkv8-27A0A0G2JF28 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Igkv8-27A0A0G2JF28 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Gm42872-201ENSMUST00000200026 1967 ntBASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Igkv8-27A0A0G2JF28 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Gm42928-201ENSMUST00000197338 3339 ntBASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Gm26571-201ENSMUST00000181399 666 ntBASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Igkv8-27A0A0G2JF28 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC9.34□□□□□ -0.91
Igkv8-27A0A0G2JF28 Gm43195-201ENSMUST00000200614 2332 ntBASIC9.34□□□□□ -0.91
Igkv8-27A0A0G2JF28 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Igkv8-27A0A0G2JF28 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms