Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm6257-201ENSMUST00000163864 910 ntBASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm9484-201ENSMUST00000195892 1159 ntBASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm21559-201ENSMUST00000220638 855 ntBASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm8587-201ENSMUST00000076538 843 ntBASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm18101-201ENSMUST00000215769 548 ntBASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms