Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 CT009510.1-201ENSMUST00000227972 270 ntBASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Gm7935-201ENSMUST00000100555 1278 ntBASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Gm12895-201ENSMUST00000122214 226 ntBASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Gm33142-201ENSMUST00000193913 867 ntBASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Cmtm5-203ENSMUST00000227441 610 ntBASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.03□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Gm7901-201ENSMUST00000120430 1597 ntBASIC10.03□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ighv1-56A0A0A6YXG2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC10.03□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC10.03□□□□□ -0.8
Ighv1-56A0A0A6YXG2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms