Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm9172-201ENSMUST00000212092 954 ntBASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 AC159093.1-201ENSMUST00000227779 380 ntBASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm45760-201ENSMUST00000212190 1782 ntBASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Rprl3-201ENSMUST00000157400 290 ntBASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm25016-201ENSMUST00000158399 131 ntBASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm44454-201ENSMUST00000198541 138 ntBASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm37648-201ENSMUST00000192072 2563 ntBASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Sorbs3-204ENSMUST00000227929 2460 ntBASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms