Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Trav6n-6A0A075B6B2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Olfr129-201ENSMUST00000122318 993 ntBASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trav6n-6A0A075B6B2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm44454-201ENSMUST00000198541 138 ntBASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.15□□□□□ -0.63
Trav6n-6A0A075B6B2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trav6n-6A0A075B6B2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trav6n-6A0A075B6B2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav6n-6A0A075B6B2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trav6n-6A0A075B6B2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav6n-6A0A075B6B2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav6n-6A0A075B6B2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm9103-201ENSMUST00000119371 405 ntBASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm15372-201ENSMUST00000120729 834 ntBASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Ank2-226ENSMUST00000189368 339 ntBASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav6n-6A0A075B6B2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms