Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.22□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Gm10231-201ENSMUST00000181584 441 ntBASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Gm27867-201ENSMUST00000184778 125 ntBASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Gm7506-201ENSMUST00000207758 815 ntBASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Gm10175-202ENSMUST00000208752 441 ntBASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav15-2-dv6-2A0A075B650 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.21□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.21□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms