Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC10.52□□□□□ -0.73
Trav7-6A0A075B640 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav7-6A0A075B640 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC10.52□□□□□ -0.73
Trav7-6A0A075B640 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav7-6A0A075B640 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.52□□□□□ -0.73
Trav7-6A0A075B640 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav7-6A0A075B640 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav7-6A0A075B640 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav7-6A0A075B640 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav7-6A0A075B640 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav7-6A0A075B640 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav7-6A0A075B640 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav7-6A0A075B640 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav7-6A0A075B640 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav7-6A0A075B640 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav7-6A0A075B640 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav7-6A0A075B640 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav7-6A0A075B640 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav7-6A0A075B640 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav7-6A0A075B640 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav7-6A0A075B640 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav7-6A0A075B640 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Gm12134-201ENSMUST00000122109 520 ntBASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Olfr129-201ENSMUST00000122318 993 ntBASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Gm19164-201ENSMUST00000210667 640 ntBASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Vti1a-206ENSMUST00000225529 1244 ntBASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Gm13034-201ENSMUST00000121342 3177 ntBASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7-6A0A075B640 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav7-6A0A075B640 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7-6A0A075B640 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7-6A0A075B640 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7-6A0A075B640 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav7-6A0A075B640 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms