Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm23547-201ENSMUST00000158210 271 ntBASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm7506-201ENSMUST00000207758 815 ntBASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15d-1-dv6d-1A0A075B624 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms