Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7n-4A0A075B620 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Matn2-206ENSMUST00000228570 2798 ntBASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Gm21814-202ENSMUST00000203277 873 ntBASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7n-4A0A075B620 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Gm12527-201ENSMUST00000117967 564 ntBASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Mir1668-201ENSMUST00000184114 107 ntBASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7n-4A0A075B620 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav7n-4A0A075B620 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7n-4A0A075B620 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7n-4A0A075B620 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7n-4A0A075B620 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7n-4A0A075B620 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav7n-4A0A075B620 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7n-4A0A075B620 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7n-4A0A075B620 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7n-4A0A075B620 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav7n-4A0A075B620 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7n-4A0A075B620 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7n-4A0A075B620 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7n-4A0A075B620 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav7n-4A0A075B620 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav7n-4A0A075B620 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7n-4A0A075B620 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trav7n-4A0A075B620 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7n-4A0A075B620 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms