Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdfS4R2K0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.5□□□□□ -0.57
PdfS4R2K0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
PdfS4R2K0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.5□□□□□ -0.57
PdfS4R2K0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.5□□□□□ -0.57
PdfS4R2K0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
PdfS4R2K0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.5□□□□□ -0.57
PdfS4R2K0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
PdfS4R2K0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.5□□□□□ -0.57
PdfS4R2K0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
PdfS4R2K0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
PdfS4R2K0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.5□□□□□ -0.57
PdfS4R2K0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.5□□□□□ -0.57
PdfS4R2K0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
PdfS4R2K0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.5□□□□□ -0.57
PdfS4R2K0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
PdfS4R2K0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
PdfS4R2K0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
PdfS4R2K0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
PdfS4R2K0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
PdfS4R2K0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.5□□□□□ -0.57
PdfS4R2K0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdfS4R2K0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.5□□□□□ -0.57
PdfS4R2K0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
PdfS4R2K0 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.5□□□□□ -0.57
PdfS4R2K0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
PdfS4R2K0 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
PdfS4R2K0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.49□□□□□ -0.57
PdfS4R2K0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
PdfS4R2K0 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
PdfS4R2K0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
PdfS4R2K0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
PdfS4R2K0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
PdfS4R2K0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
PdfS4R2K0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
PdfS4R2K0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.49□□□□□ -0.57
PdfS4R2K0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
PdfS4R2K0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
PdfS4R2K0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
PdfS4R2K0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC11.49□□□□□ -0.57
PdfS4R2K0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PdfS4R2K0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
PdfS4R2K0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PdfS4R2K0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PdfS4R2K0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms