Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn9Q9Z0S7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn9Q9Z0S7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Gm15590-201ENSMUST00000078419 552 ntBASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn9Q9Z0S7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Mir5131-201ENSMUST00000175426 93 ntBASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn9Q9Z0S7 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn9Q9Z0S7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms