Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Gm44430-201ENSMUST00000203376 995 ntBASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Gm30025-201ENSMUST00000218555 728 ntBASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Pfdn5Q9WU28 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Gm5417-201ENSMUST00000079706 384 ntBASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Gm10812-201ENSMUST00000099864 546 ntBASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn5Q9WU28 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn5Q9WU28 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms