Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Gm43433-201ENSMUST00000196573 481 ntBASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Gm7730-201ENSMUST00000212486 454 ntBASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Syt7-205ENSMUST00000224135 1557 ntBASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col13a1Q9R1N9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Gm6415-201ENSMUST00000118488 348 ntBASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Gm16198-201ENSMUST00000118766 670 ntBASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col13a1Q9R1N9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Gm44855-201ENSMUST00000205725 362 ntBASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.71□□□□□ -0.37
Col13a1Q9R1N9 Gm6888-201ENSMUST00000221983 706 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms