Protein–RNA interactions for Protein: Q9R1A9

Trex2, Three prime repair exonuclease 2, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex2Q9R1A9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Trex2Q9R1A9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trex2Q9R1A9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trex2Q9R1A9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trex2Q9R1A9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trex2Q9R1A9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.61□□□□□ -0.39
Trex2Q9R1A9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Grk6-207ENSMUST00000225925 2769 ntBASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trex2Q9R1A9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Gm7222-201ENSMUST00000117512 906 ntBASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Gm11780-201ENSMUST00000136880 516 ntBASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Gm18195-201ENSMUST00000207604 706 ntBASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trex2Q9R1A9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trex2Q9R1A9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trex2Q9R1A9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.59□□□□□ -0.39
Trex2Q9R1A9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trex2Q9R1A9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trex2Q9R1A9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trex2Q9R1A9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trex2Q9R1A9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trex2Q9R1A9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms