Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Gm15358-201ENSMUST00000119249 520 ntBASIC13.28□□□□□ -0.28
Nubp2Q9R061 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.28□□□□□ -0.28
Nubp2Q9R061 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.28□□□□□ -0.28
Nubp2Q9R061 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.28□□□□□ -0.28
Nubp2Q9R061 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.28□□□□□ -0.28
Nubp2Q9R061 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp2Q9R061 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Nubp2Q9R061 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nubp2Q9R061 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.27□□□□□ -0.28
Nubp2Q9R061 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.27□□□□□ -0.28
Nubp2Q9R061 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nubp2Q9R061 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.27□□□□□ -0.29
Nubp2Q9R061 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.27□□□□□ -0.29
Nubp2Q9R061 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.27□□□□□ -0.29
Nubp2Q9R061 Gm8000-201ENSMUST00000188378 592 ntBASIC13.27□□□□□ -0.29
Nubp2Q9R061 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.27□□□□□ -0.29
Nubp2Q9R061 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.27□□□□□ -0.29
Nubp2Q9R061 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp2Q9R061 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp2Q9R061 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp2Q9R061 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Nubp2Q9R061 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp2Q9R061 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nubp2Q9R061 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp2Q9R061 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp2Q9R061 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp2Q9R061 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp2Q9R061 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp2Q9R061 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp2Q9R061 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp2Q9R061 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp2Q9R061 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.26□□□□□ -0.29
Nubp2Q9R061 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nubp2Q9R061 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.26□□□□□ -0.29
Nubp2Q9R061 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nubp2Q9R061 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp2Q9R061 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp2Q9R061 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms