Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trim44Q9QXA7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim44Q9QXA7 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim44Q9QXA7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim44Q9QXA7 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim44Q9QXA7 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim44Q9QXA7 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.32■□□□□ 0.36
Trim44Q9QXA7 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Trim44Q9QXA7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim44Q9QXA7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim44Q9QXA7 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Trim44Q9QXA7 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim44Q9QXA7 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim44Q9QXA7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Gm9947-201ENSMUST00000067599 2920 ntBASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim44Q9QXA7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Timm23-208ENSMUST00000226683 750 ntBASIC17.3■□□□□ 0.36
Trim44Q9QXA7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim44Q9QXA7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Gm6257-201ENSMUST00000163864 910 ntBASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim44Q9QXA7 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms