Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1aQ9QWF0 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.76■□□□□ 0.27
Chaf1aQ9QWF0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1aQ9QWF0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1aQ9QWF0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1aQ9QWF0 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.76■□□□□ 0.27
Chaf1aQ9QWF0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1aQ9QWF0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chaf1aQ9QWF0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chaf1aQ9QWF0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chaf1aQ9QWF0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chaf1aQ9QWF0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chaf1aQ9QWF0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Chaf1aQ9QWF0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.75■□□□□ 0.27
Chaf1aQ9QWF0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chaf1aQ9QWF0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Chaf1aQ9QWF0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chaf1aQ9QWF0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chaf1aQ9QWF0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chaf1aQ9QWF0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chaf1aQ9QWF0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chaf1aQ9QWF0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Chaf1aQ9QWF0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Gm27646-201ENSMUST00000183989 110 ntBASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1aQ9QWF0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chaf1aQ9QWF0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Gm8318-201ENSMUST00000182954 872 ntBASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Ank2-226ENSMUST00000189368 339 ntBASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chaf1aQ9QWF0 Gm18669-201ENSMUST00000216049 778 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms