Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SrfQ9JM73 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SrfQ9JM73 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SrfQ9JM73 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SrfQ9JM73 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SrfQ9JM73 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SrfQ9JM73 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SrfQ9JM73 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SrfQ9JM73 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.04□□□□□ -0.16
SrfQ9JM73 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SrfQ9JM73 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SrfQ9JM73 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.04□□□□□ -0.16
SrfQ9JM73 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SrfQ9JM73 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SrfQ9JM73 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SrfQ9JM73 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SrfQ9JM73 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SrfQ9JM73 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SrfQ9JM73 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SrfQ9JM73 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SrfQ9JM73 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SrfQ9JM73 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SrfQ9JM73 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.03□□□□□ -0.16
SrfQ9JM73 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.03□□□□□ -0.16
SrfQ9JM73 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SrfQ9JM73 Gm27631-201ENSMUST00000184163 466 ntBASIC14.03□□□□□ -0.16
SrfQ9JM73 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SrfQ9JM73 Gm18018-201ENSMUST00000198273 408 ntBASIC14.03□□□□□ -0.16
SrfQ9JM73 Gm43703-201ENSMUST00000200523 763 ntBASIC14.03□□□□□ -0.16
SrfQ9JM73 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.03□□□□□ -0.16
SrfQ9JM73 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.03□□□□□ -0.16
SrfQ9JM73 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.03□□□□□ -0.16
SrfQ9JM73 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SrfQ9JM73 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SrfQ9JM73 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.03□□□□□ -0.16
SrfQ9JM73 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.03□□□□□ -0.16
SrfQ9JM73 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SrfQ9JM73 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SrfQ9JM73 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SrfQ9JM73 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SrfQ9JM73 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.03□□□□□ -0.16
SrfQ9JM73 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SrfQ9JM73 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SrfQ9JM73 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SrfQ9JM73 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SrfQ9JM73 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SrfQ9JM73 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SrfQ9JM73 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SrfQ9JM73 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SrfQ9JM73 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SrfQ9JM73 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SrfQ9JM73 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SrfQ9JM73 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SrfQ9JM73 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SrfQ9JM73 Gm11478-201ENSMUST00000117851 599 ntBASIC14.02□□□□□ -0.17
SrfQ9JM73 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SrfQ9JM73 Gm6745-201ENSMUST00000199216 526 ntBASIC14.02□□□□□ -0.17
SrfQ9JM73 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.02□□□□□ -0.17
SrfQ9JM73 Gm45453-201ENSMUST00000211758 853 ntBASIC14.02□□□□□ -0.17
SrfQ9JM73 Gm9229-201ENSMUST00000222777 126 ntBASIC14.02□□□□□ -0.17
SrfQ9JM73 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SrfQ9JM73 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SrfQ9JM73 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SrfQ9JM73 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SrfQ9JM73 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SrfQ9JM73 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SrfQ9JM73 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SrfQ9JM73 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SrfQ9JM73 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SrfQ9JM73 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SrfQ9JM73 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SrfQ9JM73 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SrfQ9JM73 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SrfQ9JM73 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SrfQ9JM73 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SrfQ9JM73 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SrfQ9JM73 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SrfQ9JM73 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.01□□□□□ -0.17
SrfQ9JM73 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.01□□□□□ -0.17
SrfQ9JM73 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
SrfQ9JM73 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SrfQ9JM73 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SrfQ9JM73 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SrfQ9JM73 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SrfQ9JM73 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SrfQ9JM73 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SrfQ9JM73 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.01□□□□□ -0.17
SrfQ9JM73 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.01□□□□□ -0.17
SrfQ9JM73 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SrfQ9JM73 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SrfQ9JM73 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SrfQ9JM73 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SrfQ9JM73 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SrfQ9JM73 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SrfQ9JM73 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SrfQ9JM73 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SrfQ9JM73 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.01□□□□□ -0.17
SrfQ9JM73 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SrfQ9JM73 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SrfQ9JM73 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms