Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rhox4bQ9JI43 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rhox4bQ9JI43 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rhox4bQ9JI43 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rhox4bQ9JI43 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rhox4bQ9JI43 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rhox4bQ9JI43 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rhox4bQ9JI43 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rhox4bQ9JI43 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rhox4bQ9JI43 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rhox4bQ9JI43 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rhox4bQ9JI43 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Mir6404-201ENSMUST00000183699 94 ntBASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Gm21814-202ENSMUST00000203277 873 ntBASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.1□□□□□ -0.47
Rhox4bQ9JI43 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Gm10566-201ENSMUST00000086739 996 ntBASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rhox4bQ9JI43 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rhox4bQ9JI43 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rhox4bQ9JI43 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rhox4bQ9JI43 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rhox4bQ9JI43 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rhox4bQ9JI43 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rhox4bQ9JI43 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rhox4bQ9JI43 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rhox4bQ9JI43 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.08□□□□□ -0.48
Rhox4bQ9JI43 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rhox4bQ9JI43 Gm715-201ENSMUST00000117865 831 ntBASIC12.08□□□□□ -0.48
Rhox4bQ9JI43 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rhox4bQ9JI43 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms