Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube3bQ9ES34 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube3bQ9ES34 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube3bQ9ES34 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube3bQ9ES34 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube3bQ9ES34 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube3bQ9ES34 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube3bQ9ES34 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube3bQ9ES34 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ube3bQ9ES34 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube3bQ9ES34 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube3bQ9ES34 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube3bQ9ES34 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.73■□□□□ 0.43
Ube3bQ9ES34 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube3bQ9ES34 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Gm15920-201ENSMUST00000118998 402 ntBASIC17.72■□□□□ 0.43
Ube3bQ9ES34 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Gm24158-201ENSMUST00000175263 71 ntBASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.72■□□□□ 0.43
Ube3bQ9ES34 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Gm10253-201ENSMUST00000194270 940 ntBASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Gm2451-201ENSMUST00000199447 999 ntBASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Gm10290-201ENSMUST00000200451 999 ntBASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ube3bQ9ES34 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3bQ9ES34 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3bQ9ES34 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
Ube3bQ9ES34 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3bQ9ES34 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3bQ9ES34 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3bQ9ES34 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3bQ9ES34 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3bQ9ES34 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3bQ9ES34 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3bQ9ES34 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3bQ9ES34 Gm25948-201ENSMUST00000175334 112 ntBASIC17.71■□□□□ 0.43
Ube3bQ9ES34 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.71■□□□□ 0.43
Ube3bQ9ES34 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3bQ9ES34 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3bQ9ES34 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3bQ9ES34 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Ube3bQ9ES34 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ube3bQ9ES34 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Ube3bQ9ES34 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube3bQ9ES34 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Ube3bQ9ES34 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.71■□□□□ 0.42
Ube3bQ9ES34 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3bQ9ES34 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3bQ9ES34 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3bQ9ES34 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3bQ9ES34 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3bQ9ES34 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3bQ9ES34 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3bQ9ES34 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3bQ9ES34 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3bQ9ES34 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3bQ9ES34 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3bQ9ES34 Gm7774-201ENSMUST00000200064 533 ntBASIC17.7■□□□□ 0.42
Ube3bQ9ES34 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3bQ9ES34 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3bQ9ES34 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Ube3bQ9ES34 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3bQ9ES34 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.7■□□□□ 0.42
Ube3bQ9ES34 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3bQ9ES34 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3bQ9ES34 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3bQ9ES34 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ube3bQ9ES34 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.7■□□□□ 0.42
Ube3bQ9ES34 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3bQ9ES34 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3bQ9ES34 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3bQ9ES34 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3bQ9ES34 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3bQ9ES34 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Ube3bQ9ES34 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms