Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tubb3Q9ERD7 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tubb3Q9ERD7 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tubb3Q9ERD7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tubb3Q9ERD7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.86□□□□□ -0.03
Tubb3Q9ERD7 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tubb3Q9ERD7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tubb3Q9ERD7 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Gm11764-201ENSMUST00000120221 623 ntBASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubb3Q9ERD7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tubb3Q9ERD7 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tubb3Q9ERD7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tubb3Q9ERD7 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.83□□□□□ -0.03
Tubb3Q9ERD7 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.83□□□□□ -0.03
Tubb3Q9ERD7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tubb3Q9ERD7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Tubb3Q9ERD7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Tubb3Q9ERD7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tubb3Q9ERD7 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Gm37153-201ENSMUST00000193637 231 ntBASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb3Q9ERD7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms