Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-4Q9EQM3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-4Q9EQM3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-4Q9EQM3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-4Q9EQM3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-4Q9EQM3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Nkx2-4Q9EQM3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-4Q9EQM3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-4Q9EQM3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-4Q9EQM3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-4Q9EQM3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-4Q9EQM3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.22■□□□□ 0.03
Nkx2-4Q9EQM3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-4Q9EQM3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-4Q9EQM3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Nkx2-4Q9EQM3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Nkx2-4Q9EQM3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Nkx2-4Q9EQM3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.22■□□□□ 0.03
Nkx2-4Q9EQM3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.22■□□□□ 0.03
Nkx2-4Q9EQM3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms