Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp4bQ9D8B3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Gm27300-201ENSMUST00000184085 97 ntBASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Gm27335-201ENSMUST00000184758 97 ntBASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp4bQ9D8B3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp4bQ9D8B3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp4bQ9D8B3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp4bQ9D8B3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp4bQ9D8B3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp4bQ9D8B3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Chmp4bQ9D8B3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Chmp4bQ9D8B3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp4bQ9D8B3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.77■□□□□ 0.6
Chmp4bQ9D8B3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.77■□□□□ 0.6
Chmp4bQ9D8B3 Mzt1-203ENSMUST00000227948 952 ntBASIC18.77■□□□□ 0.6
Chmp4bQ9D8B3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp4bQ9D8B3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp4bQ9D8B3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp4bQ9D8B3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp4bQ9D8B3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp4bQ9D8B3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Chmp4bQ9D8B3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Chmp4bQ9D8B3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms