Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Stag1Q9D3E6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.77■□□□□ 0.44
Stag1Q9D3E6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Stag1Q9D3E6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Stag1Q9D3E6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Stag1Q9D3E6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Stag1Q9D3E6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Stag1Q9D3E6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Stag1Q9D3E6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Stag1Q9D3E6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Stag1Q9D3E6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.77■□□□□ 0.44
Stag1Q9D3E6 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Stag1Q9D3E6 Gm38294-201ENSMUST00000192831 381 ntBASIC17.77■□□□□ 0.44
Stag1Q9D3E6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Stag1Q9D3E6 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Stag1Q9D3E6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Stag1Q9D3E6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Stag1Q9D3E6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Stag1Q9D3E6 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Stag1Q9D3E6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Stag1Q9D3E6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.77■□□□□ 0.43
Stag1Q9D3E6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Stag1Q9D3E6 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Stag1Q9D3E6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Stag1Q9D3E6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Stag1Q9D3E6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 BC037039-201ENSMUST00000192003 2205 ntBASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Gm27306-201ENSMUST00000183970 107 ntBASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Gm17837-201ENSMUST00000186435 985 ntBASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Stag1Q9D3E6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Gm8410-201ENSMUST00000117225 605 ntBASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Stag1Q9D3E6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Stag1Q9D3E6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Stag1Q9D3E6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Stag1Q9D3E6 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.74■□□□□ 0.43
Stag1Q9D3E6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Stag1Q9D3E6 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Stag1Q9D3E6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Stag1Q9D3E6 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.74■□□□□ 0.43
Stag1Q9D3E6 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Stag1Q9D3E6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.74■□□□□ 0.43
Stag1Q9D3E6 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.74■□□□□ 0.43
Stag1Q9D3E6 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.74■□□□□ 0.43
Stag1Q9D3E6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.74■□□□□ 0.43
Stag1Q9D3E6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Stag1Q9D3E6 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Stag1Q9D3E6 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Stag1Q9D3E6 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Stag1Q9D3E6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Stag1Q9D3E6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms