Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shmt2Q9CZN7 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 AV026068-213ENSMUST00000223675 1171 ntBASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shmt2Q9CZN7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Mir5131-201ENSMUST00000175426 93 ntBASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Gm2651-201ENSMUST00000203560 838 ntBASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shmt2Q9CZN7 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shmt2Q9CZN7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Shmt2Q9CZN7 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.27□□□□□ -0.12
Shmt2Q9CZN7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shmt2Q9CZN7 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shmt2Q9CZN7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.27□□□□□ -0.12
Shmt2Q9CZN7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shmt2Q9CZN7 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.27□□□□□ -0.12
Shmt2Q9CZN7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Shmt2Q9CZN7 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shmt2Q9CZN7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 109.5 ms