Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hdhd3Q9CYW4 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Gm15565-201ENSMUST00000118890 427 ntBASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hdhd3Q9CYW4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Gm14722-201ENSMUST00000118943 689 ntBASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Gm23547-201ENSMUST00000158210 271 ntBASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Gm6345-202ENSMUST00000180900 204 ntBASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Gm18032-201ENSMUST00000222541 538 ntBASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Hdhd3Q9CYW4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms