Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.84□□□□□ -0.19
Trim13Q9CYB0 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim13Q9CYB0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim13Q9CYB0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim13Q9CYB0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim13Q9CYB0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Trim13Q9CYB0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Gm45328-201ENSMUST00000210942 917 ntBASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim13Q9CYB0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Gm6345-202ENSMUST00000180900 204 ntBASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Gm9172-201ENSMUST00000212092 954 ntBASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.82□□□□□ -0.2
Trim13Q9CYB0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim13Q9CYB0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms