Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Gm27867-201ENSMUST00000184778 125 ntBASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ssu72Q9CY97 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.83□□□□□ -0.03
Ssu72Q9CY97 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ssu72Q9CY97 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.83□□□□□ -0.03
Ssu72Q9CY97 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ssu72Q9CY97 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ssu72Q9CY97 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ssu72Q9CY97 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Gm10231-201ENSMUST00000181584 441 ntBASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Gm10175-202ENSMUST00000208752 441 ntBASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ssu72Q9CY97 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Gm8097-201ENSMUST00000117903 829 ntBASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.82□□□□□ -0.04
Ssu72Q9CY97 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssu72Q9CY97 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ssu72Q9CY97 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ssu72Q9CY97 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ssu72Q9CY97 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ssu72Q9CY97 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms