Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd1lQ9CXF7 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.91■□□□□ 0.3
Chd1lQ9CXF7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd1lQ9CXF7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd1lQ9CXF7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Chd1lQ9CXF7 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Chd1lQ9CXF7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.3
Chd1lQ9CXF7 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Chd1lQ9CXF7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Chd1lQ9CXF7 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Gm15794-201ENSMUST00000120182 631 ntBASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Gm8318-201ENSMUST00000182954 872 ntBASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd1lQ9CXF7 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd1lQ9CXF7 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd1lQ9CXF7 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.87■□□□□ 0.29
Chd1lQ9CXF7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.87■□□□□ 0.29
Chd1lQ9CXF7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Chd1lQ9CXF7 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd1lQ9CXF7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd1lQ9CXF7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chd1lQ9CXF7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd1lQ9CXF7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd1lQ9CXF7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd1lQ9CXF7 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms